to_skbio_msa

MultiSequence.to_skbio_msa(indices=None)[source]

Convert to skbio TabularMSA instance.

Parameters

indices (Optional[Union[Sequence[Union[str, int]], numpy.ndarray, pandas.core.indexes.base.Index, str, int]]) – List of target sequences to select. Default is None for all sequences.

Returns

Return type

Instance of skbio.alignment.TabularMSA