get_alignment_by_tid

DatabaseUNITE.get_alignment_by_tid(ids=None, subs=False, iterator=True, like='multiseq', chunksize=100)

Get representative alignments for tids

Parameters

  • ids (Optional[Union[Sequence[Union[str, int]], numpy.ndarray, pandas.core.indexes.base.Index, str, int]]) – Target tids

  • subs (bool) – Whether to include subs

  • iterator (bool) – Whether to produce chunked generator. Default is True

  • like (str) – Result type can be ‘multiseq’(default), ‘stream’, ‘asis’, ‘seqlist’ or ‘tuples’.

  • chunksize (int) – Chunk size. Default 100 records per chunk.

Returns

  • Depends on like parameter

  • .

Return type

Union[Generator, Any]