PhyloMAF
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API Reference
Alignment (pmaf.alignment)
Biome (pmaf.biome)
RepTaxonomy
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drop_feature_by_id
drop_features_without_ranks
drop_features_without_taxa
export
find_features_by_pattern
find_features_without_taxa
from_biom
from_csv
get_feature_ids
get_lineage_by_id
get_subset
get_taxonomy_by_id
merge_duplicated_features
merge_features_by_rank
RepSequence
RepPhylogeny
FrequencyTable
SampleMetadata
BiomeAssembly
BiomeSurvey
Database (pmaf.database)
Internals (pmaf.internal)
Phylo (pmaf.phylo)
Pipe (pmaf.pipe)
Remote (pmaf.remote)
Sequence (pmaf.sequence)
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PhyloMAF (
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Biome (pmaf.biome)
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RepTaxonomy
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¶
RepTaxonomy.
copy
(
)
[source]
¶
Copy of the instance.
Return type
pmaf.biome.essentials._taxonomy.RepTaxonomy