export

BiomeAssembly.export(output_dir, prefix=None, as_otu_table=False, sep=',', **kwargs)[source]

Export data from assembly to the directory.

Parameters
  • output_dir (str) – Export directory path.

  • prefix (Optional[str]) – Prefix for output files.

  • as_otu_table (bool) – Create OTU-table from FrequncyTable and RepTaxonomy

  • sep (str) – Delimiter

  • **kwargs – Compatibility.

  • kwargs (Any) –

Return type

None